Curated List of Biomarkers, Blood Tests, and Blood Tracking
awesome quantified-self blood awesome-list quantified biomarker-discovery biomarkers vitamin blood-test blood-tracking
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Sep 15, 2021
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biomarkers
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PANDORA
data-science machine-learning data-mining bioinformatics clustering systems-biology data-visualization drug-discovery data-integration microbiome transcriptomics predictive-analytics pandora tsne umap biomarkers genomic-data-analysis clinical-data unsupervised-machine-learning
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Apr 4, 2025 - Vue
A Python-based compendium of GPU-optimized aging clocks.
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Feb 18, 2026 - Jupyter Notebook
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
machine-learning quality-control ai computer-vision deep-learning pytorch uncertainty medical-imaging segmentation bayesian convolutional-neural-networks mri-images brain-imaging neuroanatomy biomarkers
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Jan 7, 2021 - Python
A Python package for the analysis of biopsychological data.
python statistics psychology biomarkers biosignals questionnaires cortisol health-psychology stress-protocols amylase ecg-processing acute-stress
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Feb 2, 2026 - Python
Confound-isolating cross-validation approach to control for a confounding effect in a predictive model.
machine-learning cross-validation neuroscience prediction confounding statistical-tests biomarkers deconfounding confound subsampling
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Aug 30, 2019 - Python
This data-centric AI repository implements a robust deep learning method (LFBNet) for fully automated tumor segmentation in whole-body [18]F-FDG PET/CT images.
ai deep-learning medical-imaging pet data-analysis survival-analysis image-segmentation biomarkers fdg-pet lymphoma data-centric-ai whole-body-segmentation automated-pet-segmentation pet-segmentation pet-ct-segmentation
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Dec 12, 2025 - Python
A library for full-stack aging clocks design and benchmarking.
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Jan 29, 2025 - Jupyter Notebook
A prediction-based extension of network-based statistics.
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Jan 2, 2026 - MATLAB
OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.
data-science data-mining bioinformatics rna-seq r deep-neural-networks deep-learning neural-network docker-image next-generation-sequencing variable-selection feature-selection bioinformatics-pipeline classification r-package omics biomarker-discovery qpcr mirna biomarkers
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Jan 16, 2026 - R
Mendelian Randomization with Biomarker Associations for Causality with Outcomes
gwas causality-analysis associations causal-inference biomarkers metabolites mendelian-randomization
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Dec 7, 2018 - R
Text mining cancer biomarkers for the CIVIC database
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Dec 16, 2025 - Python
Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)
visualization bioinformatics deep-learning genomics tabular-data single-cell biomarker-discovery classification-algorithm biomarkers bioinfomatics-pipeline genomic-data-analysis genomics-visualization regression-algorithms data-classification bioinformatics-tool trajectory-inference cell-annotation multi-omic-integration
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May 27, 2024 - Python
Healthcare dashboard with AI-powered chart generation
ai healthcare fhir biomarkers ai-agents medplum ai-copilot copilotkit healthcare-dashboard ag-ui ag-ui-protocol
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Mar 3, 2026 - TypeScript
Official implementation of the Frechet Radiomic Distance
computer-vision evaluation medical medical-imaging feature-extraction generative-model synthesis image-quality radiology evaluation-metrics radiomics biomarkers fidelity radiomics-features synthetic-data image-quality-assessment radiomics-analysis distribution-shift quality-metric generative-ai
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Feb 26, 2026 - Python
Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontology
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May 3, 2022 - Python
A comprehensive R package for label-free proteomics data analysis and modeling
machine-learning r modeling rstats proteomics mass-spectrometry r-package differential-expression biomarkers lfq
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Nov 15, 2025 - R
Data and statistical models for biomarker shedding.
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Feb 23, 2026 - Python
Free, open-source blood work dashboard -- AI-powered PDF import, trend charts, and personalized health insights for 287+ biomarkers. Local-first, no account required.
open-source pwa ai dashboard health self-hosted free biomarkers evidence-based blood-test privacy-first pdf-import local-first health-dashboard lab-results blood-work biomarker-tracking
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Mar 9, 2026 - HTML
Profile RNA-seq data using published TB gene signatures
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Dec 15, 2025 - R
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