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Revise ASCAT resource generation instructions#2135

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CharlesARoy wants to merge 1 commit intonf-core:devfrom
CharlesARoy:ASCAT_usage_update
Open

Revise ASCAT resource generation instructions#2135
CharlesARoy wants to merge 1 commit intonf-core:devfrom
CharlesARoy:ASCAT_usage_update

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CharlesARoy commented Feb 10, 2026

Updated references and instructions for generating ASCAT resources for WES and targeted sequencing. Changed Dropbox links to Zenodo and improved clarity in steps.

PR checklist

  • This comment contains a description of changes (with reason).
  • Usage Documentation in docs/usage.md is updated.
  • [N/A ?] CHANGELOG.md is updated.

Updated references and instructions for generating ASCAT resources for WES and targeted sequencing. Changed Dropbox links to Zenodo and improved clarity in steps.
CharlesARoy requested review from FriederikeHanssen and maxulysse as code owners February 10, 2026 21:47
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nf-core-bot commented Feb 10, 2026

Warning

Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 3.5.1.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation.

famosab added this to the 3.9.0 milestone Feb 11, 2026
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FriederikeHanssen Awaiting requested review from FriederikeHanssen FriederikeHanssen is a code owner

maxulysse Awaiting requested review from maxulysse maxulysse is a code owner

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3 participants