citecorp
Client for the Open Citations Corpus http://opencitations.net/ (OCC)
OCC created their own identifiers called Open Citation Identifiers (oci), e.g.,
06180334099-06101759895
You are probably not going to be using oci identifiers, but rather DOIs
and/or PMIDs and/or PMCIDs. See ?oc_lookup for methods for
cross-walking among identifier types.
If you'd like to use the OpenCitations Sparql endpoint yourself you can find that at http://opencitations.net/sparql
Install
CRAN version
install.packages("citecorp")
Development version
remotes::install_github("ropensci/citecorp")
library("citecorp")
Methods for converting IDs
oc_doi2ids("10.1039/c9sc00991d")
#> doi paper pmcid
#> 1 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 2 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> pmid
#> 1 31857888
#> 2 31859689
oc_pmid2ids("31857888")
#> doi paper pmcid
#> 1 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 2 10.1039/c9sc02702e https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> pmid
#> 1 31857888
#> 2 31857888
oc_pmcid2ids("PMC6422012")
#> doi paper pmcid
#> 1 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 2 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 3 10.1039/c9sc02702e https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 4 10.1039/c9sc02702e https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> pmid
#> 1 31859689
#> 2 31857888
#> 3 31857888
#> 4 31859689
#> doi paper pmcid
#> 1 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 2 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> pmid
#> 1 31857888
#> 2 31859689
oc_pmid2ids("31857888")
#> doi paper pmcid
#> 1 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 2 10.1039/c9sc02702e https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> pmid
#> 1 31857888
#> 2 31857888
oc_pmcid2ids("PMC6422012")
#> doi paper pmcid
#> 1 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 2 10.1039/c9sc00991d https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 3 10.1039/c9sc02702e https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> 4 10.1039/c9sc02702e https://w3id.org/oc/meta/br/061103888040 PMC6422012
#> pmid
#> 1 31859689
#> 2 31857888
#> 3 31857888
#> 4 31859689
You can pass in more than one identifer to each of the above functions:
oc_doi2ids(oc_dois[1:6])
#> doi paper
#> 1 10.1097/rli.0b013e31821eea45 https://w3id.org/oc/meta/br/0630171503
#> 2 10.1111/j.2042-3306.1989.tb02167.x https://w3id.org/oc/meta/br/062601718144
#> 3 10.1128/jvi.00758-10 https://w3id.org/oc/meta/br/061401102284
#> 4 10.1016/s0168-9525(99)01798-9 https://w3id.org/oc/meta/br/062603752185
#> 5 10.1177/0148607114529597 https://w3id.org/oc/meta/br/061102146039
#> 6 10.1111/1567-1364.12217 https://w3id.org/oc/meta/br/06603713132
#> 7 10.1016/s0168-9525(99)01798-9 https://w3id.org/oc/meta/br/06170394225
#> pmid
#> 1 21577119
#> 2 2670542
#> 3 20702630
#> 4 10461200
#> 5 24711119
#> 6 25263709
#> 7
#> doi paper
#> 1 10.1097/rli.0b013e31821eea45 https://w3id.org/oc/meta/br/0630171503
#> 2 10.1111/j.2042-3306.1989.tb02167.x https://w3id.org/oc/meta/br/062601718144
#> 3 10.1128/jvi.00758-10 https://w3id.org/oc/meta/br/061401102284
#> 4 10.1016/s0168-9525(99)01798-9 https://w3id.org/oc/meta/br/062603752185
#> 5 10.1177/0148607114529597 https://w3id.org/oc/meta/br/061102146039
#> 6 10.1111/1567-1364.12217 https://w3id.org/oc/meta/br/06603713132
#> 7 10.1016/s0168-9525(99)01798-9 https://w3id.org/oc/meta/br/06170394225
#> pmid
#> 1 21577119
#> 2 2670542
#> 3 20702630
#> 4 10461200
#> 5 24711119
#> 6 25263709
#> 7
COCI methods
OpenCitations Index of Crossref open DOI-to-DOI references
If you don't load tibble you get normal data.frame's
library(tibble)
doi1 <- "10.1108/jd-12-2013-0166"
# references
oc_coci_refs(doi1)
#> # A tibble: 44 x 7
#> timespan citing creation oci author_sc journal_sc cited
#> *
#> 1 P1Y10M10D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.5...
#> 2 P9Y2M5D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 3 P1Y5M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 4 P1Y5M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 5 P43Y 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 6 P5Y10M20D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 7 P5Y2M27D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 8 P2Y0M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 9 P49Y7M9D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 10 P2Y2M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> # i 34 more rows
# citations
oc_coci_cites(doi1)
#> # A tibble: 34 x 7
#> timespan citing creation oci author_sc journal_sc cited
#> *
#> 1 P6Y0M1D 10.7717/peerj-cs.421 2021-03... 0610... no no 10.1...
#> 2 P4Y8M16D 10.3233/ds-190019 2019-11... 0610... no no 10.1...
#> 3 P4Y8M16D 10.3233/ds-190016 2019-11... 0610... yes no 10.1...
#> 4 P3Y10M12D 10.3233/sw-180307 2019-01... 0610... no no 10.1...
#> 5 P1Y0M14D 10.3233/sw-160224 2016-03... 0610... yes no 10.1...
#> 6 P2Y4M 10.1057/s41275-017-0070-x 2017-08 0610... no no 10.1...
#> 7 P2Y11M20D 10.7287/peerj.preprints.... 2018-03... 0611... no no 10.1...
#> 8 P1Y11M5D 10.1101/108480 2017-02... 0613... no no 10.1...
#> 9 P3Y10M29D 10.59350/zcrhs-r7h02 2019-02... 0613... no no 10.1...
#> 10 P2Y 10.1007/978-3-030-01379-... 2018 0615... yes no 10.1...
#> # i 24 more rows
# metadata
oc_coci_meta(doi1)
#> # A tibble: 1 x 13
#> oa_link issue reference source_title doi citation year citation_count title
#> *
#> 1 "" 2 10.1136/... Journal Of ... 10.1... 10.1057... 2015... 34 Sett...
#> # i 4 more variables: page, source_id , volume , author
doi1 <- "10.1108/jd-12-2013-0166"
# references
oc_coci_refs(doi1)
#> # A tibble: 44 x 7
#> timespan citing creation oci author_sc journal_sc cited
#> *
#> 1 P1Y10M10D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.5...
#> 2 P9Y2M5D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 3 P1Y5M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 4 P1Y5M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 5 P43Y 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 6 P5Y10M20D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 7 P5Y2M27D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 8 P2Y0M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 9 P49Y7M9D 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> 10 P2Y2M 10.1108/jd-12-2013-0166 2015-03-09 0618... no no 10.1...
#> # i 34 more rows
# citations
oc_coci_cites(doi1)
#> # A tibble: 34 x 7
#> timespan citing creation oci author_sc journal_sc cited
#> *
#> 1 P6Y0M1D 10.7717/peerj-cs.421 2021-03... 0610... no no 10.1...
#> 2 P4Y8M16D 10.3233/ds-190019 2019-11... 0610... no no 10.1...
#> 3 P4Y8M16D 10.3233/ds-190016 2019-11... 0610... yes no 10.1...
#> 4 P3Y10M12D 10.3233/sw-180307 2019-01... 0610... no no 10.1...
#> 5 P1Y0M14D 10.3233/sw-160224 2016-03... 0610... yes no 10.1...
#> 6 P2Y4M 10.1057/s41275-017-0070-x 2017-08 0610... no no 10.1...
#> 7 P2Y11M20D 10.7287/peerj.preprints.... 2018-03... 0611... no no 10.1...
#> 8 P1Y11M5D 10.1101/108480 2017-02... 0613... no no 10.1...
#> 9 P3Y10M29D 10.59350/zcrhs-r7h02 2019-02... 0613... no no 10.1...
#> 10 P2Y 10.1007/978-3-030-01379-... 2018 0615... yes no 10.1...
#> # i 24 more rows
# metadata
oc_coci_meta(doi1)
#> # A tibble: 1 x 13
#> oa_link issue reference source_title doi citation year citation_count title
#> *
#> 1 "" 2 10.1136/... Journal Of ... 10.1... 10.1057... 2015... 34 Sett...
#> # i 4 more variables: page
Meta
- Please report any issues or bugs
- License: MIT
- Get citation information for
citecorpin R doingcitation(package = 'citecorp') - Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.