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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement nf-core AWS full size tests #442: Pull request #1746 submitted by Copilot AI

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Copilot code review Copilot code review #5: by Copilot AI

3m 56s refs/pull/1746/head

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nf-core linting comment nf-core linting comment #11406: completed by EladH1

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement nf-core AWS full size tests #441: Pull request #1746 submitted by EladH1

nf-core linting comment nf-core linting comment #11405: in_progress by EladH1

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nf-core linting comment nf-core linting comment #11404: requested by EladH1

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement Nextflow strict syntax lint #469: Pull request #1746 synchronize by EladH1

26s EladH1:kraken_raw

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement nf-core linting #4791: Pull request #1746 synchronize by EladH1

3m 0s EladH1:kraken_raw

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement Run nf-test #1034: Pull request #1746 synchronize by EladH1

16m 46s EladH1:kraken_raw

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement Run nf-test on ARM #626: Pull request #1746 synchronize by EladH1

18m 4s EladH1:kraken_raw

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement Run GPU nf-tests #266: Pull request #1746 synchronize by EladH1

14m 41s EladH1:kraken_raw

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement nf-core template version comment #1002: Pull request #1746 synchronize by EladH1

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement Fix linting from a comment #305: Issue comment #1746 (comment) created by EladH1

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement Fix linting from a comment #304: Issue comment #1746 (comment) created by nf-core-bot

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Copilot code review Copilot code review #4: by Copilot AI

4m 34s refs/pull/1746/head

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Add evaluation of trimmed data and aligners kranken - check contamination before aligners - enhancement nf-core template version comment #1001: Pull request #1746 opened by EladH1

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Close user-tagged issues and PRs Close user-tagged issues and PRs #145: Scheduled

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Pipe line Error with HiSAT2 Aligner Fix linting from a comment #303: Issue comment #1288 (comment) created by kauralasoo

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NFCORE_RNASEQ:RNASEQ:FASTQ_ALIGN_HISAT2:HISAT2_ALIGN (pituitary_stage3-1) terminated with an error exit status (1) Fix linting from a comment #302: Issue comment #1270 (comment) created by kauralasoo

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Merge pull request #1745 from nf-core/fix/igenomes-base-validation Run GPU nf-tests #265: Commit d6f6145 pushed by pinin4fjords

39m 57s dev

dev

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Merge pull request #1745 from nf-core/fix/igenomes-base-validation Nextflow strict syntax lint #468: Commit d6f6145 pushed by pinin4fjords

26s dev

dev

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fix: always skip igenomes_base validation nf-core AWS full size tests #440: Pull request #1745 submitted by maxulysse

nf-core linting comment nf-core linting comment #11403: completed by pinin4fjords

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nf-core linting comment nf-core linting comment #11402: completed by pinin4fjords

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nf-core linting comment nf-core linting comment #11401: in_progress by pinin4fjords

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