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MobleyLab/slow-rotations-systems

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Here, we supply the input files for each system used for testing the slow-rotations code.

Each directory contains the simulation start files for each system as well as the GROMACS MDP files and SLURM run scripts

  • hipen: gas phase NVT simulations of the HiPen dataset
  • mpro: protein-ligand complex in solvent NPT simulations
  • mcl1: protein-ligand complex in solvent NPT Separated Topologies binding free energy calculation

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Input files used for simulations to test slow-rotations

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